Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905261.1_cds_XP_016455460.1_49388
CDS Infomation

[gene=LOC107779522] [db_xref=GeneID:107779522] [protein=histidinol dehydrogenase, chloroplastic-like isoform X2] [protein_id=XP_016455460.1] [location=join(25102..25194,25307..25359,26346..26418,26610..26711,26822..26923,27027..27098,27175..27237,27379..27420,28514..28573,28712..28822,29060..29230,29417..29507,32469..32752)] [gbkey=CDS]
Sequence

ATGAAGTCATATAGGTTATCAGAGCTTAGCAGTTCTGAGGTTGACAGCCTCAAAGCTCGT
CCACGCATTGATTTCTCCTCCATTTTCAACATAGTTCAACCCATTGTTGATGATGTCCGT
AATAGAGGTGATGCAGCAGTTAAAGATTACACGTCGCGGTTTGACAAAGTTGTACTGGAT
AAGATAGTTGAAGATGTCAATGAACTTCCAGATCCTGAGCTTGATTCAGCTGTTCGAGAA
GCATTTGATGTGGCATATAACAACATATATGCCTTTCATGCTGCTCAAAAGCCTGTTGAG
AAAGTTGTGGAGAACATGCATGGTGTCAGATGTAAACGTGTGGCTAGGAGCATTGCCTCT
GTAGGGCTTTATGTTCCTGGTGGAACTGCTATTTTACCTTCTACAGCTCTGATGCTTTCA
GTTCCAGCACAAATTGCTGGGTGTAAAACTGTTGTACTTGCAACTCCACCTTCTCGGGAT
GGCAGTATTTGCAAGGAAGTGCTTTATTGTGCCAAGAAAGCAGGTGTGACCCACATCCTT
AAAGCTGGAGGTGCTCAGGCAATTTCTGCTATGGCCTGGGGCACTGAATCCTGCCCAAAG
GTTGAGAAGATATATGGGCCTGGGAATCAGTATGTCACCGCTGCAAAAATGATTCTGCAG
AACAGCGAAGCTATGGTTTCAATCGACATGCCGGCTGGGCCTTCAGAAGTCCTTGTTATA
GCTGACAAGCATTCCAGTCCTATCCATGTGGCAGCAGATTTACTTTCACAGGCAGAGCAT
GGGCCAGATAGCCAAGTCGTACTGGTTATTGCCGGGGATGGTGTTGATCTATATGCTATT
CAAGAGGAAATAAGGAAGCAGTGCCAAGCCCTTCCAAGGGAAGAAATTGCACTTCAGGCA
CTTAGCCACAGCTTCACTGTGTTAGCACAGGATATGCTTGAGGCAATTTCCTTCTCAAAC
ATGTATGCACCTGAGCATCTGATAATCAATGTGAATGAAGCTGAGAAGTGGGAAAGTTTA
ATTGAGAATGCAGGTTCTGTATTTATGGGACAGTGGACACCTGAGAGTATAGGAGATTAT
GCAAGTGGAACTAACCATGTTCTGCCAACTTACGGGTATGCACGTATGTATGGTGGGGTC
TCTTTAGACTCTTTCTTGAAATACATTACCGTGCAGTCTTTGACAGAAGAAGGGCTGAGG
AATCTTGGCCCCTACGTGGAGAAAATGGCCGAAGTTGAGGGTTTGGATGCCCACAAGAGG
GCTGTAACCCTCAGACTGCAGGACATAGAAGCGAGGCAAGTATCACACTCAAGATGA

Peptide Sequence

PEP ID

XP_016455460.1
PEP Infomation

PREDICTED: histidinol dehydrogenase, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MKSYRLSELSSSEVDSLKARPRIDFSSIFNIVQPIVDDVRNRGDAAVKDYTSRFDKVVLD
KIVEDVNELPDPELDSAVREAFDVAYNNIYAFHAAQKPVEKVVENMHGVRCKRVARSIAS
VGLYVPGGTAILPSTALMLSVPAQIAGCKTVVLATPPSRDGSICKEVLYCAKKAGVTHIL
KAGGAQAISAMAWGTESCPKVEKIYGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVI
ADKHSSPIHVAADLLSQAEHGPDSQVVLVIAGDGVDLYAIQEEIRKQCQALPREEIALQA
LSHSFTVLAQDMLEAISFSNMYAPEHLIINVNEAEKWESLIENAGSVFMGQWTPESIGDY
ASGTNHVLPTYGYARMYGGVSLDSFLKYITVQSLTEEGLRNLGPYVEKMAEVEGLDAHKR
AVTLRLQDIEARQVSHSR

Transcript Sequence

Gene sequence data has not been registered.